That's about it. You can run patch scans now while WSUS is still enabled to see where you stand with patching without it interfering with WSUS. I just wouldn't try to push anything out with WSUS enabled. If it doesn't work out, you can just put the policy back to enable WSUS. Alternatively, you could disable the policy for a test group to make sure Kaseya patching is working as expected before enabling it across the board.
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